PLUMED: PLUMED is starting
PLUMED: Version: 2.11.0-dev (git: b9f2f56) compiled on Jun 10 2026 at 07:51:05
PLUMED: Please cite these papers when using PLUMED [1][2]
PLUMED: For further information see the PLUMED web page at http://www.plumed.org
PLUMED: Root: /home/runner/opt/lib/plumed
PLUMED: LibraryPath: /home/runner/opt/lib/libplumedKernel.so
PLUMED: For installed feature, see /home/runner/opt/lib/plumed/src/config/config.txt
PLUMED: Molecular dynamics engine: driver
PLUMED: Precision of reals: 8
PLUMED: Running over 1 node
PLUMED: Number of threads: 2
PLUMED: Cache line size: 512
PLUMED: Number of atoms: 100000
PLUMED: File suffix: 
PLUMED: Timestep: 1.000000
PLUMED: KbT: 2.490000
PLUMED: Relevant bibliography:
PLUMED:   [1] The PLUMED consortium, Nat. Methods 16, 670 (2019)
PLUMED:   [2] Tribello, Bonomi, Branduardi, Camilloni, and Bussi, Comput. Phys. Commun. 185, 604 (2014)
PLUMED: Please read and cite where appropriate!
PLUMED: Finished setup
PLUMED: Action GYRATION
PLUMED:   with label g1
PLUMED:   atomic positions all have unit weights in averages 
PLUMED:   GYRATION RADIUS (Rg);
PLUMED:   atoms involved : 1 2 3 4 5 6 
PLUMED:   broken molecules will be rebuilt assuming atoms are in the proper order
PLUMED: Action GYRATION
PLUMED:   with label g2
PLUMED:   atomic positions all have unit weights in averages 
PLUMED:   GYRATION RADIUS (Rg);
PLUMED:   atoms involved : 7 8 9 10 11 12 
PLUMED:   broken molecules will be rebuilt assuming atoms are in the proper order
PLUMED: Action GYRATION
PLUMED:   with label g3
PLUMED:   atomic positions all have unit weights in averages 
PLUMED:   GYRATION RADIUS (Rg);
PLUMED:   atoms involved : 13 14 15 16 17 18 
PLUMED:   broken molecules will be rebuilt assuming atoms are in the proper order
PLUMED: Action PRINT
PLUMED:   with label @6
PLUMED:   with stride 1
PLUMED:   with arguments : 
PLUMED:    scalar with label g1 
PLUMED:    scalar with label g2 
PLUMED:    scalar with label g3 
PLUMED:   on file colvar
PLUMED:   with format  %f
PLUMED:                                               Cycles        Total      Average      Minimum      Maximum
PLUMED:                                                    1     0.009308     0.009308     0.009308     0.009308
