SAXS.md working 1.dat.plumed.stderr
Stderr for source: SAXS.md_working_1.dat
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#! Only the first 1000 rows of the error file are shown below #! To inspect the full error file, please download the zipped raw stderr file above terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): ********** STACK DUMP ********** /home/runner/opt/lib/libplumedKernel.so(_ZN4PLMD9ExceptionC1Ev+0x22b) [0x7f4d203d7a6b] /home/runner/opt/lib/libplumedKernel.so(+0x3c4a61) [0x7f4d1f7c4a61] /home/runner/opt/lib/libplumedKernel.so(_ZN4PLMD18ActionRegistrationINS_14GenericMolInfoEE6createERKNS_13ActionOptionsE+0x27) [0x7f4d1fe85d77] /home/runner/opt/lib/libplumedKernel.so(_ZN4PLMD14ActionRegister6createERKSt6vectorIPvSaIS2_EERKNS_13ActionOptionsE+0x263) [0x7f4d1fc0c573] /home/runner/opt/lib/libplumedKernel.so(_ZN4PLMD10PlumedMain14readInputWordsERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EERKb+0x2da) [0x7f4d1fc9203a] /home/runner/opt/lib/libplumedKernel.so(_ZN4PLMD7cltools6DriverIdE4mainEP8_IO_FILES4_RNS_12CommunicatorE+0x6574) [0x7f4d1f979804] /home/runner/opt/lib/libplumedKernel.so(_ZN4PLMD10CLToolMain3runEiPPcP8_IO_FILES4_RNS_12CommunicatorE+0x72a) [0x7f4d1fc49b4a] /home/runner/opt/lib/libplumedKernel.so(_ZN4PLMD10CLToolMain3cmdESt17basic_string_viewIcSt11char_traitsIcEERKNS_11TypesafePtrE+0x54e) [0x7f4d1fc4c62e] /home/runner/opt/lib/libplumedKernel.so(_ZN4PLMD10PlumedMain3cmdESt17basic_string_viewIcSt11char_traitsIcEERKNS_11TypesafePtrE+0x12f4) [0x7f4d1fc9a4f4] /home/runner/opt/lib/libplumedKernel.so(+0x8a3c31) [0x7f4d1fca3c31] plumed(+0x1e1e7) [0x558e79d2b1e7] plumed(+0x14d41) [0x558e79d21d41] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90) [0x7f4d1ec29d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80) [0x7f4d1ec29e40] plumed(+0x14eb5) [0x558e79d21eb5] ********** END STACK DUMP ********** (core/GenericMolInfo.cpp:93) PLMD::GenericMolInfo::GenericMolInfo(const PLMD::ActionOptions&) missing input file template_AA.pdb [runnervmyg876:60043] *** Process received signal *** [runnervmyg876:60043] Signal: Aborted (6) [runnervmyg876:60043] Signal code: (-6) [runnervmyg876:60043] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f4d1ec42520] [runnervmyg876:60043] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f4d1ec969fc] [runnervmyg876:60043] [ 2] /lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f4d1ec42476] [runnervmyg876:60043] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f4d1ec287f3] [runnervmyg876:60043] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa2b9e)[0x7f4d1f0a2b9e] [runnervmyg876:60043] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xae20c)[0x7f4d1f0ae20c] [runnervmyg876:60043] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xae277)[0x7f4d1f0ae277] [runnervmyg876:60043] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(__cxa_rethrow+0x4b)[0x7f4d1f0ae52b] [runnervmyg876:60043] [ 8] plumed(+0x14254)[0x558e79d21254] [runnervmyg876:60043] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f4d1ec29d90] [runnervmyg876:60043] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f4d1ec29e40] [runnervmyg876:60043] [11] plumed(+0x14eb5)[0x558e79d21eb5] [runnervmyg876:60043] *** End of error message ***