Shortcut: UWALLS
| Module | multicolvar |
|---|---|
| Description | Usage |
| Add lower walls to a vector of quantities |
Deprecated
This action has been deprecated and is no longer supported. Use UPPER_WALLS instead.
Details and examples
Add lower walls to a vector of quantities
Depracated action: use UPPER_WALLS
Input
The atoms that serve as the input for this action are specified using one or more of the keywords in the following table.
| Keyword | Type | Description |
|---|---|---|
| CATOMS | atoms | all the angles between the bonds that radiate out from these central atom are computed |
| GROUP | atoms | a list of angls between pairs of bonds connecting one of the atoms specified using the CATOM command and two of the atoms specified here are computed |
Output components
This action calculates the values in the following table. These values can be referenced elsewhere in the input by using this Action's label followed by a dot and the name of the value required from the list below.
| Name | Type | Description |
|---|---|---|
| bias | scalar | the instantaneous value of the bias potential |
| force2 | scalar | the instantaneous value of the squared force due to this bias potential |
Full list of keywords
The following table describes the keywords and options that can be used with this action
| Keyword | Type | Default | Description |
|---|---|---|---|
| CATOMS | input | none | all the angles between the bonds that radiate out from these central atom are computed |
| GROUP | input | none | a list of angls between pairs of bonds connecting one of the atoms specified using the CATOM command and two of the atoms specified here are computed |
| DATA | compulsory | none | the values you want to restrain |
| AT | compulsory | none | the radius of the sphere |
| KAPPA | compulsory | none | the force constant for the wall |
| OFFSET | compulsory | 0.0 | the offset for the start of the wall |
| EXP | compulsory | 2.0 | the powers for the walls |
| EPS | compulsory | 1.0 | the values for s_i in the expression for a wall |
| SWITCH | compulsory | none | the switching function specifies that only those bonds that have a length that is less than a certain threshold are considered |