Here is a list of all variables with links to the classes they belong to:
- t -
- t : PLMD::MatrixSquareBracketsAccess< T, C, I, J >::Const_row, PLMD::MatrixSquareBracketsAccess< T, C, I, J >::Row, PLMD::molfile::trx_hdr
- tab_exp_ : PLMD::isdb::EMMI
- tag : PLMD::lepton::ExpressionTreeNode
- TAILS : PLMD::membranefusion::fusionPoreExpansionP, PLMD::membranefusion::fusionPoreNucleationP, PLMD::membranefusion::memFusionP
- TAMD : PLMD::logmfd::LogMFD
- target : PLMD::lepton::CompiledExpression, PLMD::TargetDist
- target_coupling_ : PLMD::eds::EDS
- targetdist_averages_filename_ : PLMD::ves::VesBias
- targetdist_averages_output_fmt_ : PLMD::ves::Optimizer
- targetdist_averages_pntr_ : PLMD::ves::LinearBasisSetExpansion
- targetdist_averages_pntrs_ : PLMD::ves::Optimizer, PLMD::ves::VesBias
- targetdist_averages_wstride_ : PLMD::ves::Optimizer
- targetdist_averagesOFiles_ : PLMD::ves::Optimizer
- targetdist_file_fmt_ : PLMD::ves::VesBias
- targetdist_filename_ : PLMD::ves::VesBias
- targetdist_grid_label_ : PLMD::ves::LinearBasisSetExpansion
- targetdist_grid_pntr_ : PLMD::ves::LinearBasisSetExpansion, PLMD::ves::TargetDistribution
- targetdist_modifer_pntrs_ : PLMD::ves::TargetDistribution
- targetdist_output_active_ : PLMD::ves::Optimizer
- targetdist_output_stride_ : PLMD::ves::Optimizer
- targetdist_pntr_ : PLMD::ves::LinearBasisSetExpansion
- targetdist_pntrs_ : PLMD::ves::VesBias
- targetdist_proj_output_active_ : PLMD::ves::Optimizer
- targetdist_proj_output_stride_ : PLMD::ves::Optimizer
- targetdist_restart_file_fmt_ : PLMD::ves::VesBias
- targetfilename_ : PLMD::bias::MetaD
- TargetGrid_ : PLMD::bias::MetaD
- task2_index : PLMD::MultiValue
- task_control_list : PLMD::ActionWithVector
- task_index : PLMD::MultiValue
- tau : PLMD::bias::ExtendedLagrangian, PLMD::bias::MaxEnt
- td : PLMD::xdrfile::t_trnheader
- temp : PLMD::bias::ABMD, PLMD::drr::UIestimator::n_matrix, PLMD::drr::UIestimator::n_vector< T >
- temperature : PLMD::colvar::Dimer, PLMD::drr::UIestimator::UIestimator
- tempering_names_ : PLMD::bias::MetaD
- tend : PLMD::bias::MaxEnt
- test : PLMD::piv::PIV
- text : PLMD::lepton::ParseToken
- tf : PLMD::xdrfile::t_trnheader
- tg_counter_ : PLMD::ves::VesDeltaF
- tg_d2V_dAlpha2_ : PLMD::ves::VesDeltaF
- tg_dV_dAlpha_ : PLMD::ves::VesDeltaF
- tg_stride_ : PLMD::ves::VesDeltaF
- thermostat : PLMD::logmfd::LogMFD
- thisactname : PLMD::Keywords
- threeblocks : PLMD::adjmat::AdjacencyMatrixBase
- threecells : PLMD::adjmat::AdjacencyMatrixBase
- thresh : PLMD::wham::Wham
- threshold : PLMD::bias::MetaD::TemperingSpecs
- threshold2_ : PLMD::opes::OPESmetad< mode >
- threshold_ : PLMD::fisst::FISST, PLMD::ves::TD_Multicanonical, PLMD::ves::TD_MultithermalMultibaric
- threshold_switch : PLMD::adjmat::TopologyMatrix
- Ti : PLMD::sasa::SASA_HASEL, PLMD::sasa::SASA_LCPO
- time : PLMD::isdb::Caliber, PLMD::molfile::md_ts, PLMD::Units
- time_ : PLMD::ves::Opt_Adam
- time_md : PLMD::ves::CoeffsBase
- timer : PLMD::piv::PIV
- timestep : PLMD::Action
- timeString : PLMD::Units
- timeval : PLMD::molfile::md_header
- TINY : PLMD::Minimise1DBrent< FCLASS >
- title : PLMD::molfile::md_header, PLMD::molfile::molfile_metadata_t, PLMD::molfile::trx_hdr
- tmom : PLMD::symfunc::CylindricalHarmonic, PLMD::symfunc::SphericalHarmonic
- tmp_atom_der : PLMD::MultiValue
- tmp_atom_virial : PLMD::MultiValue
- tmp_atoms : PLMD::MultiValue
- tmp_vectors : PLMD::MultiValue
- tmpder : PLMD::MultiValue
- tmpval : PLMD::MultiValue
- to : PLMD::bias::ABMD
- todoAutomatic_ : PLMD::opes::ECVlinear, PLMD::opes::ECVmultiThermal
- todoAutomatic_beta_ : PLMD::opes::ECVmultiThermalBaric
- todoAutomatic_pres_ : PLMD::opes::ECVmultiThermalBaric
- TOL : PLMD::mapping::PathReparameterization
- tol : PLMD::Brent1DRootSearch< FCLASS >, PLMD::Minimise1DBrent< FCLASS >
- top_size : PLMD::molfile::trx_hdr, PLMD::xdrfile::t_trnheader
- tot_prob_ : PLMD::ves::VesDeltaF
- tot_size : PLMD::isdb::NOE, PLMD::isdb::PRE
- tot_work : PLMD::bias::MovingRestraint
- total : PLMD::Stopwatch::Watch
- total_dist_ : PLMD::maze::Random_Acceleration_MD, PLMD::maze::Steered_MD
- total_distance_ : PLMD::maze::OptimizerBias
- total_prefactor_ : PLMD::s2cm::S2ContactModel
- totalcharge : PLMD::molfile::molfile_qm_sysinfo_t
- totalWork : PLMD::bias::MaxEnt
- totcsatoms : PLMD::isdb::CS2Backbone::ChemicalShift
- totNumECVs_ : PLMD::opes::ExpansionCVs
- transf_deriv_expression_ : PLMD::ves::BF_Custom
- transf_deriv_lepton_ref_ : PLMD::ves::BF_Custom
- transf_value_expression_ : PLMD::ves::BF_Custom
- transf_value_lepton_ref_ : PLMD::ves::BF_Custom
- transf_variable_str_ : PLMD::ves::BF_Custom
- transition_bias_ : PLMD::bias::MetaD
- transitionwells_ : PLMD::bias::MetaD
- translation : PLMD::maze::Member
- trimer : PLMD::colvar::Dimer
- trx : PLMD::molfile::md_file
- tstart : PLMD::bias::MaxEnt
- tt_specs_ : PLMD::bias::MetaD
- twolists_ : PLMD::NeighborList
- type : PLMD::bias::MaxEnt, PLMD::colvar::RMSDVector, PLMD::Communicator::ConstData, PLMD::Communicator::Data, PLMD::FlexibleBin, PLMD::generic::CreateMask, PLMD::generic::DumpAtoms, PLMD::generic::FitToTemplate, PLMD::generic::ResetCell, PLMD::HistogramBead, PLMD::isdb::CS2Backbone, PLMD::lepton::ParseToken, PLMD::molfile::molfile_atom_t, PLMD::molfile::molfile_graphics_t, PLMD::molfile::molfile_qm_wavefunction_t, PLMD::Pbc, PLMD::ves::FermiSwitchingFunction
- type_ : PLMD::ves::BasisFunctions, PLMD::ves::Optimizer, PLMD::ves::TargetDistribution
- types : PLMD::Keywords
- typesTable : PLMD::colvar::GHBFIX