Line data    Source code

       1         831 :   word_map["setBox"]=cmd_setBox;
       2         831 :   word_map["setPositions"]=cmd_setPositions;
       3         831 :   word_map["setMasses"]=cmd_setMasses;
       4         831 :   word_map["setCharges"]=cmd_setCharges;
       5         831 :   word_map["setPositionsX"]=cmd_setPositionsX;
       6         831 :   word_map["setPositionsY"]=cmd_setPositionsY;
       7         831 :   word_map["setPositionsZ"]=cmd_setPositionsZ;
       8         831 :   word_map["setVirial"]=cmd_setVirial;
       9         831 :   word_map["setEnergy"]=cmd_setEnergy;
      10         831 :   word_map["setForces"]=cmd_setForces;
      11         831 :   word_map["setForcesX"]=cmd_setForcesX;
      12         831 :   word_map["setForcesY"]=cmd_setForcesY;
      13         831 :   word_map["setForcesZ"]=cmd_setForcesZ;
      14         831 :   word_map["calc"]=cmd_calc;
      15         831 :   word_map["prepareDependencies"]=cmd_prepareDependencies;
      16         831 :   word_map["shareData"]=cmd_shareData;
      17         831 :   word_map["prepareCalc"]=cmd_prepareCalc;
      18         831 :   word_map["performCalc"]=cmd_performCalc;
      19         831 :   word_map["performCalcNoUpdate"]=cmd_performCalcNoUpdate;
      20         831 :   word_map["update"]=cmd_update;
      21         831 :   word_map["setStep"]=cmd_setStep;
      22         831 :   word_map["setStepLong"]=cmd_setStepLong;
      23         831 :   word_map["setAtomsNlocal"]=cmd_setAtomsNlocal;
      24         831 :   word_map["setAtomsGatindex"]=cmd_setAtomsGatindex;
      25         831 :   word_map["setAtomsFGatindex"]=cmd_setAtomsFGatindex;
      26         831 :   word_map["setAtomsContiguous"]=cmd_setAtomsContiguous;
      27         831 :   word_map["createFullList"]=cmd_createFullList;
      28         831 :   word_map["getFullList"]=cmd_getFullList;
      29         831 :   word_map["clearFullList"]=cmd_clearFullList;
      30         831 :   word_map["read"]=cmd_read;
      31         831 :   word_map["readInputLine"]=cmd_readInputLine;
      32         831 :   word_map["clear"]=cmd_clear;
      33         831 :   word_map["getApiVersion"]=cmd_getApiVersion;
      34         831 :   word_map["init"]=cmd_init;
      35         831 :   word_map["setRealPrecision"]=cmd_setRealPrecision;
      36         831 :   word_map["setMDLengthUnits"]=cmd_setMDLengthUnits;
      37         831 :   word_map["setMDChargeUnits"]=cmd_setMDChargeUnits;
      38         831 :   word_map["setMDMassUnits"]=cmd_setMDMassUnits;
      39         831 :   word_map["setMDEnergyUnits"]=cmd_setMDEnergyUnits;
      40         831 :   word_map["setMDTimeUnits"]=cmd_setMDTimeUnits;
      41         831 :   word_map["setNaturalUnits"]=cmd_setNaturalUnits;
      42         831 :   word_map["setNoVirial"]=cmd_setNoVirial;
      43         831 :   word_map["setPlumedDat"]=cmd_setPlumedDat;
      44         831 :   word_map["setMPIComm"]=cmd_setMPIComm;
      45         831 :   word_map["setMPIFComm"]=cmd_setMPIFComm;
      46         831 :   word_map["setMPImultiSimComm"]=cmd_setMPImultiSimComm;
      47         831 :   word_map["setNatoms"]=cmd_setNatoms;
      48         831 :   word_map["setTimestep"]=cmd_setTimestep;
      49         831 :   word_map["setKbT"]=cmd_setKbT;
      50         831 :   word_map["setRestart"]=cmd_setRestart;
      51         831 :   word_map["doCheckPoint"]=cmd_doCheckPoint;
      52         831 :   word_map["setMDEngine"]=cmd_setMDEngine;
      53         831 :   word_map["setLog"]=cmd_setLog;
      54         831 :   word_map["setLogFile"]=cmd_setLogFile;
      55         831 :   word_map["setStopFlag"]=cmd_setStopFlag;
      56         831 :   word_map["getExchangesFlag"]=cmd_getExchangesFlag;
      57         831 :   word_map["setExchangesSeed"]=cmd_setExchangesSeed;
      58         831 :   word_map["setNumberOfReplicas"]=cmd_setNumberOfReplicas;
      59         831 :   word_map["getExchangesList"]=cmd_getExchangesList;
      60         831 :   word_map["runFinalJobs"]=cmd_runFinalJobs;
      61         831 :   word_map["isEnergyNeeded"]=cmd_isEnergyNeeded;
      62         831 :   word_map["getBias"]=cmd_getBias;
      63         831 :   word_map["checkAction"]=cmd_checkAction;
      64         831 :   word_map["GREX"]=cmd_GREX;
      65         831 :   word_map["CLTool"]=cmd_CLTool;