| accumulate(const unsigned &ipoint, const double &weight, const double &dens, const std::vector< double > &der, std::vector< double > &buffer) const | PLMD::gridtools::HistogramOnGrid | virtual |
| accumulateForce(const unsigned &ipoint, const double &weight, const std::vector< double > &der, std::vector< double > &intforce) const | PLMD::gridtools::HistogramOnGrid | virtual |
| action | PLMD::vesselbase::Vessel | private |
| activateThesePoints(const std::vector< bool > &to_activate) | PLMD::gridtools::GridVessel | |
| active | PLMD::gridtools::GridVessel | protected |
| addDataElement(const unsigned &myelem, const double &value) | PLMD::vesselbase::AveragingVessel | inlineprotected |
| addOneKernelAtATime | PLMD::gridtools::HistogramOnGrid | private |
| addOneKernelEachTimeOnly() | PLMD::gridtools::HistogramOnGrid | inline |
| addToGridElement(const unsigned &ipoint, const unsigned &jelement, const double &value) | PLMD::gridtools::GridVessel | |
| applyForce(std::vector< double > &fforces) override | PLMD::gridtools::GridVessel | virtual |
| arg_names | PLMD::gridtools::GridVessel | protected |
| AveragingVessel(const vesselbase::VesselOptions &) | PLMD::vesselbase::AveragingVessel | explicit |
| bandwidths | PLMD::gridtools::HistogramOnGrid | private |
| bounds_set | PLMD::gridtools::GridVessel | private |
| bufsize | PLMD::vesselbase::Vessel | private |
| bufstart | PLMD::vesselbase::Vessel | protected |
| calculate(const unsigned ¤t, MultiValue &myvals, std::vector< double > &buffer, std::vector< unsigned > &der_list) const override | PLMD::gridtools::HistogramOnGrid | virtual |
| checkRead() | PLMD::vesselbase::Vessel | |
| clear() | PLMD::vesselbase::AveragingVessel | virtual |
| convertIndexToIndices(const unsigned &index, const std::vector< unsigned > &nnbin, std::vector< unsigned > &indices) const | PLMD::gridtools::GridVessel | |
| cube_units | PLMD::gridtools::GridVessel | private |
| currentGridPoint | PLMD::gridtools::GridVessel | private |
| data | PLMD::vesselbase::AveragingVessel | private |
| description() override | PLMD::gridtools::GridVessel | virtual |
| dimension | PLMD::gridtools::GridVessel | protected |
| discrete | PLMD::gridtools::HistogramOnGrid | protected |
| dx | PLMD::gridtools::GridVessel | protected |
| error(const std::string &errmsg) | PLMD::vesselbase::Vessel | protected |
| fib_increment | PLMD::gridtools::GridVessel | private |
| fib_nlist | PLMD::gridtools::GridVessel | private |
| fib_offset | PLMD::gridtools::GridVessel | private |
| fib_shift | PLMD::gridtools::GridVessel | private |
| fibonacci enum value | PLMD::gridtools::GridVessel | private |
| finalForces | PLMD::gridtools::GridVessel | private |
| finish(const std::vector< double > &buffer) override | PLMD::gridtools::HistogramOnGrid | virtual |
| finished_read | PLMD::vesselbase::Vessel | private |
| flat enum value | PLMD::gridtools::GridVessel | private |
| forces | PLMD::gridtools::GridVessel | protected |
| foundprint | PLMD::gridtools::GridVessel | private |
| getAction() const | PLMD::vesselbase::Vessel | inlineprotected |
| getAllInput() | PLMD::vesselbase::Vessel | protected |
| getCellVolume() const | PLMD::gridtools::GridVessel | inline |
| getComponentName(const unsigned &i) const | PLMD::gridtools::GridVessel | inline |
| getCubeUnits() const | PLMD::gridtools::GridVessel | |
| getDataElement(const unsigned &myelem) const | PLMD::vesselbase::AveragingVessel | inlineprotected |
| getDimension() const | PLMD::gridtools::GridVessel | inline |
| getFibonacciCoordinates(const unsigned &ipoint, std::vector< double > &x) const | PLMD::gridtools::GridVessel | protected |
| getFibonacciCutoff() const override | PLMD::gridtools::HistogramOnGrid | virtual |
| getFibonacciIndex(const std::vector< double > &p) const | PLMD::gridtools::GridVessel | protected |
| getFinalForces(const std::vector< double > &buffer, std::vector< double > &finalForces) override | PLMD::gridtools::HistogramOnGrid | virtual |
| getFlatGridCoordinates(const unsigned &ipoint, std::vector< unsigned > &tindices, std::vector< double > &x) const | PLMD::gridtools::GridVessel | protected |
| getGridElement(const std::vector< unsigned > &, const unsigned &) const | PLMD::gridtools::GridVessel | |
| getGridElement(const unsigned &, const unsigned &) const | PLMD::gridtools::GridVessel | virtual |
| getGridExtent(const unsigned &i) const | PLMD::gridtools::GridVessel | inline |
| getGridPointCoordinates(const unsigned &, std::vector< double > &) const | PLMD::gridtools::GridVessel | |
| getGridPointCoordinates(const unsigned &, std::vector< unsigned > &, std::vector< double > &) const | PLMD::gridtools::GridVessel | |
| getGridSpacing() const | PLMD::gridtools::GridVessel | inline |
| getIndex(const std::vector< double > &p) const | PLMD::gridtools::GridVessel | protected |
| getIndex(const std::vector< unsigned > &indices) const | PLMD::gridtools::GridVessel | |
| getIndices(const unsigned &index, std::vector< unsigned > &indices) const | PLMD::gridtools::GridVessel | |
| getIndices(const std::vector< double > &point, std::vector< unsigned > &indices) const | PLMD::gridtools::GridVessel | |
| getInputString() const | PLMD::gridtools::GridVessel | |
| getKernelAndNeighbors(std::vector< double > &point, unsigned &num_neigh, std::vector< unsigned > &neighbors) const | PLMD::gridtools::HistogramOnGrid | |
| getLabel() const | PLMD::vesselbase::Vessel | |
| getMax() const | PLMD::gridtools::GridVessel | |
| getMin() const | PLMD::gridtools::GridVessel | |
| getName() const | PLMD::vesselbase::Vessel | |
| getNbin() const | PLMD::gridtools::GridVessel | |
| getNeighbors(const std::vector< double > &pp, const std::vector< unsigned > &nneigh, unsigned &num_neighbours, std::vector< unsigned > &neighbors) const | PLMD::gridtools::GridVessel | |
| getNeighbors(const std::vector< unsigned > &indices, const std::vector< unsigned > &nneigh, unsigned &num_neighbors, std::vector< unsigned > &neighbors) const | PLMD::gridtools::GridVessel | |
| getNLTolerance() const | PLMD::vesselbase::Vessel | inlineprotected |
| getNorm() const | PLMD::vesselbase::AveragingVessel | inline |
| getNumberOfBufferPoints() const override | PLMD::gridtools::HistogramOnGrid | inlinevirtual |
| getNumberOfComponents() const | PLMD::gridtools::GridVessel | inlinevirtual |
| getNumberOfPoints() const | PLMD::gridtools::GridVessel | inline |
| getNumberOfQuantities() const | PLMD::gridtools::GridVessel | inline |
| getNumericalLabel() const | PLMD::vesselbase::Vessel | inlineprotected |
| getSizeOfBuffer() const | PLMD::vesselbase::Vessel | inlineprotected |
| getSplineNeighbors(const unsigned &mybox, unsigned &nneighbors, std::vector< unsigned > &mysneigh) const | PLMD::gridtools::GridVessel | |
| getStride() const | PLMD::gridtools::GridVessel | inline |
| getTolerance() const | PLMD::vesselbase::Vessel | inlineprotected |
| getType() const | PLMD::gridtools::GridVessel | inline |
| getValueAndDerivatives(const std::vector< double > &x, const unsigned &ind, std::vector< double > &der) const | PLMD::gridtools::GridVessel | |
| getVectorOfValues() const | PLMD::gridtools::HistogramOnGrid | |
| golden | PLMD::gridtools::GridVessel | private |
| GridVessel(const vesselbase::VesselOptions &) | PLMD::gridtools::GridVessel | explicit |
| gtype | PLMD::gridtools::GridVessel | private |
| HistogramOnGrid(const vesselbase::VesselOptions &da) | PLMD::gridtools::HistogramOnGrid | explicit |
| igolden | PLMD::gridtools::GridVessel | private |
| inactive(const unsigned &ip) const | PLMD::gridtools::GridVessel | inline |
| isPeriodic(const unsigned &i) const | PLMD::gridtools::GridVessel | inline |
| kerneltype | PLMD::gridtools::HistogramOnGrid | private |
| keywords | PLMD::vesselbase::Vessel | private |
| line | PLMD::vesselbase::Vessel | private |
| log_golden2 | PLMD::gridtools::GridVessel | private |
| max | PLMD::gridtools::GridVessel | private |
| min | PLMD::gridtools::GridVessel | private |
| mylabel | PLMD::vesselbase::Vessel | private |
| myname | PLMD::vesselbase::Vessel | private |
| nbin | PLMD::gridtools::GridVessel | private |
| neigh_tot | PLMD::gridtools::HistogramOnGrid | private |
| nneigh | PLMD::gridtools::HistogramOnGrid | private |
| noAverage() const | PLMD::vesselbase::AveragingVessel | inlineprotected |
| noderiv | PLMD::gridtools::GridVessel | protected |
| noDerivatives() const | PLMD::gridtools::GridVessel | inline |
| noDiscreteKernels() const | PLMD::gridtools::HistogramOnGrid | |
| nper | PLMD::gridtools::GridVessel | protected |
| npoints | PLMD::gridtools::GridVessel | private |
| numlab | PLMD::vesselbase::Vessel | private |
| parse(const std::string &key, T &t) | PLMD::vesselbase::Vessel | protected |
| parseFlag(const std::string &key, bool &t) | PLMD::vesselbase::Vessel | protected |
| parseVector(const std::string &key, std::vector< T > &t) | PLMD::vesselbase::Vessel | protected |
| pbc | PLMD::gridtools::GridVessel | protected |
| prepare() | PLMD::vesselbase::Vessel | inlinevirtual |
| registerKeywords(Keywords &keys) | PLMD::gridtools::HistogramOnGrid | static |
| reset() | PLMD::vesselbase::AveragingVessel | virtual |
| resize() override | PLMD::gridtools::GridVessel | virtual |
| resizeBuffer(const unsigned &n) | PLMD::vesselbase::Vessel | inlineprotected |
| root5 | PLMD::gridtools::GridVessel | private |
| setBounds(const std::vector< std::string > &smin, const std::vector< std::string > &smax, const std::vector< unsigned > &nbins, const std::vector< double > &spacing) override | PLMD::gridtools::HistogramOnGrid | virtual |
| setBufferStart(unsigned &start) | PLMD::vesselbase::Vessel | inlinevirtual |
| setCubeUnits(const double &units) | PLMD::gridtools::GridVessel | |
| setDataElement(const unsigned &myelem, const double &value) | PLMD::vesselbase::AveragingVessel | inlineprotected |
| setDataSize(const unsigned &size) | PLMD::vesselbase::AveragingVessel | protected |
| setForce(const std::vector< double > &inforces) | PLMD::gridtools::GridVessel | |
| setGridElement(const unsigned &, const unsigned &, const double &) | PLMD::gridtools::GridVessel | |
| setGridElement(const std::vector< unsigned > &, const unsigned &, const double &) | PLMD::gridtools::GridVessel | |
| setNoDerivatives() | PLMD::gridtools::GridVessel | |
| setNorm(const double &snorm) | PLMD::vesselbase::AveragingVessel | inline |
| setupFibonacciGrid(const unsigned &np) | PLMD::gridtools::GridVessel | |
| setValueAndDerivatives(const unsigned &, const unsigned &, const double &, const std::vector< double > &) | PLMD::gridtools::GridVessel | |
| str_max | PLMD::gridtools::GridVessel | protected |
| str_min | PLMD::gridtools::GridVessel | protected |
| stride | PLMD::gridtools::GridVessel | private |
| transformDerivatives(const unsigned ¤t, MultiValue &myvals, MultiValue &bvals) | PLMD::vesselbase::Vessel | inlinevirtual |
| transformName(const std::string &name) | PLMD::vesselbase::Vessel | static |
| unormalised | PLMD::vesselbase::AveragingVessel | private |
| Vessel(const VesselOptions &da) | PLMD::vesselbase::Vessel | explicit |
| von_misses_concentration | PLMD::gridtools::HistogramOnGrid | |
| von_misses_norm | PLMD::gridtools::HistogramOnGrid | |
| wascleared | PLMD::vesselbase::AveragingVessel | private |
| wasforced | PLMD::gridtools::GridVessel | protected |
| wasForced() const | PLMD::gridtools::GridVessel | |
| wasreset() const | PLMD::vesselbase::AveragingVessel | |
| ~Vessel() | PLMD::vesselbase::Vessel | inlinevirtual |
1.8.17