Public Member Functions | Protected Member Functions | Private Types | Private Member Functions | Private Attributes | List of all members
PLMD::ves::CoeffsBase Class Reference
Tool Box

#include <CoeffsBase.h>

Inheritance diagram for PLMD::ves::CoeffsBase:
Inheritance graph
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Public Member Functions

 CoeffsBase ()
 
 CoeffsBase (const std::string &, const std::vector< std::string > &, const std::vector< unsigned int > &, const bool use_iteration_counter=false)
 
 CoeffsBase (const std::string &, const std::vector< Value * > &, std::vector< BasisFunctions * > &, const bool use_iteration_counter=false)
 
 CoeffsBase (const std::string &, std::vector< std::vector< Value * > > &, std::vector< std::vector< BasisFunctions * > > &, const bool use_iteration_counter=false, const std::string &multicoeffs_label="bias")
 
 ~CoeffsBase ()
 
void activate ()
 
void checkCoeffsInfo (const std::string &, const std::string &, const unsigned int, const size_t, const std::vector< unsigned int > &)
 
void deactivate ()
 
std::vector< std::string > getAllCoeffsDescriptions () const
 
std::vector< std::string > getAllDimensionLabels () const
 
std::string getCoeffDescription (const size_t index) const
 
std::string getCoeffDescription (const std::vector< unsigned int > &) const
 
void getCoeffsInfoFromFile (IFile &, const bool ignore_coeffs_info=false)
 
std::string getDataLabel () const
 
std::string getDimensionLabel (const unsigned int) const
 
size_t getIndex (const std::vector< unsigned int > &) const
 
std::vector< unsigned int > getIndices (const size_t) const
 
unsigned int getIterationCounter () const
 
std::string getLabel () const
 
std::string getOutputFmt () const
 
Action * getPntrToAction () const
 
VesBias * getPntrToVesBias () const
 
double getTimeValue () const
 
CoeffsType getType () const
 
std::string getTypeStr () const
 
bool indicesExist (const std::vector< unsigned int > &) const
 
bool isActive () const
 
bool isGenericCoeffs () const
 
bool isIterationCounterActive () const
 
bool isLinearBasisSetCoeffs () const
 
bool isMultiLinearBasisSetCoeffs () const
 
void linkAction (Action *)
 
void linkVesBias (VesBias *)
 
size_t numberOfCoeffs () const
 
unsigned int numberOfDimensions () const
 
void replaceLabelString (const std::string &, const std::string &)
 
void resetOutputFmt ()
 
void setAllCoeffsDescriptions (const std::string &description_prefix="C")
 
void setAllCoeffsDescriptions (const std::vector< std::string > &)
 
void setAllDimensionLabels (const std::string &)
 
void setAllDimensionLabels (const std::vector< std::string > &)
 
void setCoeffDescription (const size_t, const std::string &)
 
void setCoeffDescription (const std::vector< unsigned int > &, const std::string &)
 
void setDataLabel (const std::string &)
 
void setDimensionLabel (const unsigned int, const std::string &)
 
void setIterationCounter (const unsigned int)
 
void setIterationCounterAndTime (const unsigned int, const double)
 
void setLabel (const std::string &)
 
void setLabels (const std::string &)
 
void setLabels (const std::string &, const std::string &)
 
void setOutputFmt (const std::string &ss)
 
void setTime (const double)
 
void setType (const CoeffsType coeffs_type)
 
std::vector< unsigned int > shapeOfIndices () const
 
unsigned int shapeOfIndices (const unsigned int dim_index) const
 
void turnOffIterationCounter ()
 
void turnOnIterationCounter ()
 
void writeCoeffsInfoToFile (OFile &) const
 
void writeTimeInfoToFile (OFile &, const double) const
 

Protected Member Functions

bool getIterationCounterAndTimeFromFile (IFile &)
 
void resizeIndices (const std::vector< unsigned int > &)
 
void resizeIndices (std::vector< BasisFunctions * > &)
 
bool sameShape (const CoeffsBase &) const
 
void setupBasisFunctionsInfo ()
 
void writeIterationCounterAndTimeToFile (OFile &) const
 

Private Types

enum  CoeffsType { Generic, LinearBasisSet, MultiCoeffs_LinearBasisSet }
 

Private Member Functions

void initializeIndices (const std::vector< unsigned int > &, const std::vector< std::string > &)
 
void reinitializeIndices (const std::vector< unsigned int > &)
 

Private Attributes

Action * action_pntr_
 
bool active
 
std::vector< Value * > args_
 
std::vector< BasisFunctions * > basisf_
 
std::vector< std::string > coeffs_descriptions_
 
enum PLMD::ves::CoeffsBase::CoeffsType coeffs_type_
 
std::string data_label_
 
std::vector< std::string > dimension_labels_
 
const std::string field_iteration_
 
const std::string field_ncoeffs_total_
 
const std::string field_ndimensions_
 
const std::string field_shape_prefix_
 
const std::string field_time_
 
const std::string field_type_
 
std::vector< unsigned int > indices_shape_
 
bool iteration_and_time_active_
 
unsigned int iteration_opt
 
std::string label_
 
bool multicoeffs_
 
std::vector< std::vector< Value * > > multicoeffs_args_
 
std::vector< std::vector< BasisFunctions * > > multicoeffs_basisf_
 
size_t ncoeffs_
 
unsigned int ndimensions_
 
std::string output_fmt_
 
double time_md
 
VesBias * vesbias_pntr_
 

Member Enumeration Documentation

◆ CoeffsType

enum PLMD::ves::CoeffsBase::CoeffsType
private
Enumerator
Generic 
LinearBasisSet 
MultiCoeffs_LinearBasisSet 

Constructor & Destructor Documentation

◆ CoeffsBase() [1/4]

PLMD::ves::CoeffsBase::CoeffsBase ( )
explicit

◆ CoeffsBase() [2/4]

PLMD::ves::CoeffsBase::CoeffsBase ( const std::string &  label,
const std::vector< std::string > &  dimension_labels,
const std::vector< unsigned int > &  indices_shape,
const bool  use_iteration_counter = false 
)
explicit

◆ CoeffsBase() [3/4]

PLMD::ves::CoeffsBase::CoeffsBase ( const std::string &  label,
const std::vector< Value * > &  args,
std::vector< BasisFunctions * > &  basisf,
const bool  use_iteration_counter = false 
)
explicit

◆ CoeffsBase() [4/4]

PLMD::ves::CoeffsBase::CoeffsBase ( const std::string &  label,
std::vector< std::vector< Value * > > &  multicoeffs_args,
std::vector< std::vector< BasisFunctions * > > &  multicoeffs_basisf,
const bool  use_iteration_counter = false,
const std::string &  multicoeffs_label = "bias" 
)
explicit

◆ ~CoeffsBase()

PLMD::ves::CoeffsBase::~CoeffsBase ( )

Member Function Documentation

◆ activate()

void PLMD::ves::CoeffsBase::activate ( )
inline

◆ checkCoeffsInfo()

void PLMD::ves::CoeffsBase::checkCoeffsInfo ( const std::string &  msg_header,
const std::string &  coeffs_type_f,
const unsigned int  ndimensions_f,
const size_t  ncoeffs_total_f,
const std::vector< unsigned int > &  indices_shape_f 
)

◆ deactivate()

void PLMD::ves::CoeffsBase::deactivate ( )
inline

◆ getAllCoeffsDescriptions()

std::vector<std::string> PLMD::ves::CoeffsBase::getAllCoeffsDescriptions ( ) const
inline

◆ getAllDimensionLabels()

std::vector<std::string> PLMD::ves::CoeffsBase::getAllDimensionLabels ( ) const
inline

◆ getCoeffDescription() [1/2]

std::string PLMD::ves::CoeffsBase::getCoeffDescription ( const size_t  index) const
inline

◆ getCoeffDescription() [2/2]

std::string PLMD::ves::CoeffsBase::getCoeffDescription ( const std::vector< unsigned int > &  indices) const
inline

◆ getCoeffsInfoFromFile()

void PLMD::ves::CoeffsBase::getCoeffsInfoFromFile ( IFile &  ifile,
const bool  ignore_coeffs_info = false 
)

◆ getDataLabel()

std::string PLMD::ves::CoeffsBase::getDataLabel ( ) const
inline

◆ getDimensionLabel()

std::string PLMD::ves::CoeffsBase::getDimensionLabel ( const unsigned int  dim_index) const
inline

◆ getIndex()

size_t PLMD::ves::CoeffsBase::getIndex ( const std::vector< unsigned int > &  indices) const
inline

◆ getIndices()

std::vector< unsigned int > PLMD::ves::CoeffsBase::getIndices ( const size_t  index) const
inline

◆ getIterationCounter()

unsigned int PLMD::ves::CoeffsBase::getIterationCounter ( ) const
inline

◆ getIterationCounterAndTimeFromFile()

bool PLMD::ves::CoeffsBase::getIterationCounterAndTimeFromFile ( IFile &  ifile)
protected

◆ getLabel()

std::string PLMD::ves::CoeffsBase::getLabel ( ) const
inline

◆ getOutputFmt()

std::string PLMD::ves::CoeffsBase::getOutputFmt ( ) const
inline

◆ getPntrToAction()

Action* PLMD::ves::CoeffsBase::getPntrToAction ( ) const
inline

◆ getPntrToVesBias()

VesBias* PLMD::ves::CoeffsBase::getPntrToVesBias ( ) const
inline

◆ getTimeValue()

double PLMD::ves::CoeffsBase::getTimeValue ( ) const
inline

◆ getType()

CoeffsType PLMD::ves::CoeffsBase::getType ( ) const
inline

◆ getTypeStr()

std::string PLMD::ves::CoeffsBase::getTypeStr ( ) const

◆ indicesExist()

bool PLMD::ves::CoeffsBase::indicesExist ( const std::vector< unsigned int > &  indices) const

◆ initializeIndices()

void PLMD::ves::CoeffsBase::initializeIndices ( const std::vector< unsigned int > &  indices_shape,
const std::vector< std::string > &  dimension_labels 
)
private

◆ isActive()

bool PLMD::ves::CoeffsBase::isActive ( ) const
inline

◆ isGenericCoeffs()

bool PLMD::ves::CoeffsBase::isGenericCoeffs ( ) const
inline

◆ isIterationCounterActive()

bool PLMD::ves::CoeffsBase::isIterationCounterActive ( ) const
inline

◆ isLinearBasisSetCoeffs()

bool PLMD::ves::CoeffsBase::isLinearBasisSetCoeffs ( ) const
inline

◆ isMultiLinearBasisSetCoeffs()

bool PLMD::ves::CoeffsBase::isMultiLinearBasisSetCoeffs ( ) const
inline

◆ linkAction()

void PLMD::ves::CoeffsBase::linkAction ( Action *  action_pntr_in)

◆ linkVesBias()

void PLMD::ves::CoeffsBase::linkVesBias ( VesBias *  vesbias_pntr_in)

◆ numberOfCoeffs()

size_t PLMD::ves::CoeffsBase::numberOfCoeffs ( ) const
inline

◆ numberOfDimensions()

unsigned int PLMD::ves::CoeffsBase::numberOfDimensions ( ) const
inline

◆ reinitializeIndices()

void PLMD::ves::CoeffsBase::reinitializeIndices ( const std::vector< unsigned int > &  indices_shape_new)
private

◆ replaceLabelString()

void PLMD::ves::CoeffsBase::replaceLabelString ( const std::string &  oldstring,
const std::string &  newstring 
)

◆ resetOutputFmt()

void PLMD::ves::CoeffsBase::resetOutputFmt ( )
inline

◆ resizeIndices() [1/2]

void PLMD::ves::CoeffsBase::resizeIndices ( const std::vector< unsigned int > &  indices_shape_new)
protected

◆ resizeIndices() [2/2]

void PLMD::ves::CoeffsBase::resizeIndices ( std::vector< BasisFunctions * > &  basisf_new)
protected

◆ sameShape()

bool PLMD::ves::CoeffsBase::sameShape ( const CoeffsBase &  coeffsbase_in) const
protected

◆ setAllCoeffsDescriptions() [1/2]

void PLMD::ves::CoeffsBase::setAllCoeffsDescriptions ( const std::string &  description_prefix = "C")

◆ setAllCoeffsDescriptions() [2/2]

void PLMD::ves::CoeffsBase::setAllCoeffsDescriptions ( const std::vector< std::string > &  coeffs_descriptions)

◆ setAllDimensionLabels() [1/2]

void PLMD::ves::CoeffsBase::setAllDimensionLabels ( const std::string &  label_prefix)

◆ setAllDimensionLabels() [2/2]

void PLMD::ves::CoeffsBase::setAllDimensionLabels ( const std::vector< std::string > &  labels)

◆ setCoeffDescription() [1/2]

void PLMD::ves::CoeffsBase::setCoeffDescription ( const size_t  index,
const std::string &  description 
)

◆ setCoeffDescription() [2/2]

void PLMD::ves::CoeffsBase::setCoeffDescription ( const std::vector< unsigned int > &  indices,
const std::string &  description 
)

◆ setDataLabel()

void PLMD::ves::CoeffsBase::setDataLabel ( const std::string &  data_label)

◆ setDimensionLabel()

void PLMD::ves::CoeffsBase::setDimensionLabel ( const unsigned int  dim_index,
const std::string &  label 
)

◆ setIterationCounter()

void PLMD::ves::CoeffsBase::setIterationCounter ( const unsigned int  iteration_opt_in)
inline

◆ setIterationCounterAndTime()

void PLMD::ves::CoeffsBase::setIterationCounterAndTime ( const unsigned int  iteration_opt_in,
const double  time_md_in 
)
inline

◆ setLabel()

void PLMD::ves::CoeffsBase::setLabel ( const std::string &  label)

◆ setLabels() [1/2]

void PLMD::ves::CoeffsBase::setLabels ( const std::string &  label)

◆ setLabels() [2/2]

void PLMD::ves::CoeffsBase::setLabels ( const std::string &  label,
const std::string &  data_label 
)

◆ setOutputFmt()

void PLMD::ves::CoeffsBase::setOutputFmt ( const std::string &  ss)
inline

◆ setTime()

void PLMD::ves::CoeffsBase::setTime ( const double  time_md_in)
inline

◆ setType()

void PLMD::ves::CoeffsBase::setType ( const CoeffsType  coeffs_type)

◆ setupBasisFunctionsInfo()

void PLMD::ves::CoeffsBase::setupBasisFunctionsInfo ( )
protected

◆ shapeOfIndices() [1/2]

std::vector<unsigned int> PLMD::ves::CoeffsBase::shapeOfIndices ( ) const
inline

◆ shapeOfIndices() [2/2]

unsigned int PLMD::ves::CoeffsBase::shapeOfIndices ( const unsigned int  dim_index) const
inline

◆ turnOffIterationCounter()

void PLMD::ves::CoeffsBase::turnOffIterationCounter ( )
inline

◆ turnOnIterationCounter()

void PLMD::ves::CoeffsBase::turnOnIterationCounter ( )
inline

◆ writeCoeffsInfoToFile()

void PLMD::ves::CoeffsBase::writeCoeffsInfoToFile ( OFile &  ofile) const

◆ writeIterationCounterAndTimeToFile()

void PLMD::ves::CoeffsBase::writeIterationCounterAndTimeToFile ( OFile &  ofile) const
protected

◆ writeTimeInfoToFile()

void PLMD::ves::CoeffsBase::writeTimeInfoToFile ( OFile &  ,
const double   
) const

Member Data Documentation

◆ action_pntr_

Action* PLMD::ves::CoeffsBase::action_pntr_
private

◆ active

bool PLMD::ves::CoeffsBase::active
private

◆ args_

std::vector<Value*> PLMD::ves::CoeffsBase::args_
private

◆ basisf_

std::vector<BasisFunctions*> PLMD::ves::CoeffsBase::basisf_
private

◆ coeffs_descriptions_

std::vector<std::string> PLMD::ves::CoeffsBase::coeffs_descriptions_
private

◆ coeffs_type_

enum PLMD::ves::CoeffsBase::CoeffsType PLMD::ves::CoeffsBase::coeffs_type_
private

◆ data_label_

std::string PLMD::ves::CoeffsBase::data_label_
private

◆ dimension_labels_

std::vector<std::string> PLMD::ves::CoeffsBase::dimension_labels_
private

◆ field_iteration_

const std::string PLMD::ves::CoeffsBase::field_iteration_
private

◆ field_ncoeffs_total_

const std::string PLMD::ves::CoeffsBase::field_ncoeffs_total_
private

◆ field_ndimensions_

const std::string PLMD::ves::CoeffsBase::field_ndimensions_
private

◆ field_shape_prefix_

const std::string PLMD::ves::CoeffsBase::field_shape_prefix_
private

◆ field_time_

const std::string PLMD::ves::CoeffsBase::field_time_
private

◆ field_type_

const std::string PLMD::ves::CoeffsBase::field_type_
private

◆ indices_shape_

std::vector<unsigned int> PLMD::ves::CoeffsBase::indices_shape_
private

◆ iteration_and_time_active_

bool PLMD::ves::CoeffsBase::iteration_and_time_active_
private

◆ iteration_opt

unsigned int PLMD::ves::CoeffsBase::iteration_opt
private

◆ label_

std::string PLMD::ves::CoeffsBase::label_
private

◆ multicoeffs_

bool PLMD::ves::CoeffsBase::multicoeffs_
private

◆ multicoeffs_args_

std::vector<std::vector<Value*> > PLMD::ves::CoeffsBase::multicoeffs_args_
private

◆ multicoeffs_basisf_

std::vector<std::vector<BasisFunctions*> > PLMD::ves::CoeffsBase::multicoeffs_basisf_
private

◆ ncoeffs_

size_t PLMD::ves::CoeffsBase::ncoeffs_
private

◆ ndimensions_

unsigned int PLMD::ves::CoeffsBase::ndimensions_
private

◆ output_fmt_

std::string PLMD::ves::CoeffsBase::output_fmt_
private

◆ time_md

double PLMD::ves::CoeffsBase::time_md
private

◆ vesbias_pntr_

VesBias* PLMD::ves::CoeffsBase::vesbias_pntr_
private
The documentation for this class was generated from the following files:
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