Here is a list of all class members with links to the classes they belong to:
- l -
- l : PLMD::ActionToPutData
- label_ : PLMD::maze::Optimizer, PLMD::ves::CoeffsBase, PLMD::ves::LinearBasisSetExpansion
- labels : PLMD::colvar::PathMSDBase
- lagmultfname : PLMD::bias::MaxEnt
- lagmultOfile_ : PLMD::bias::MaxEnt
- lambda : PLMD::bias::MaxEnt, PLMD::colvar::PathMSDBase, PLMD::function::FuncPathGeneral, PLMD::function::FuncPathMSD, PLMD::molfile::trx_hdr, PLMD::switchContainers::Data
- lambda0_ : PLMD::opes::ECVlinear
- lambda_ : PLMD::ves::TD_Exponential
- lambdad : PLMD::xdrfile::t_trnheader
- lambdaf : PLMD::xdrfile::t_trnheader
- lambdas_ : PLMD::ves::TD_ExponentiallyModifiedGaussian
- LandmarkSelection() : PLMD::landmarks::LandmarkSelection
- lap : PLMD::Stopwatch::Watch
- lastLap : PLMD::Stopwatch::Watch
- lastStart : PLMD::Stopwatch::Watch
- lastupdate_ : PLMD::NeighborList
- lboundDerivative() : PLMD::HistogramBead
- lcell_lists : PLMD::LinkCells::CellCollection
- lcell_starts : PLMD::LinkCells::CellCollection
- lcell_tots : PLMD::LinkCells::CellCollection
- LCPOparam : PLMD::isdb::SAXS, PLMD::sasa::SASA_LCPO
- learn_replica : PLMD::bias::MaxEnt
- LeftParen : PLMD::lepton::ParseToken
- len : PLMD::mapping::PathReparameterization
- len_bi : PLMD::volumes::VolumeCavity, PLMD::volumes::VolumeTetrapore
- len_cross : PLMD::volumes::VolumeCavity, PLMD::volumes::VolumeTetrapore
- len_perp : PLMD::volumes::VolumeCavity, PLMD::volumes::VolumeTetrapore
- length() : PLMD::metatomic::vesin::cpu::GrowableNeighborList, PLMD::metatomic::vesin::VesinNeighborList, PLMD::Units
- lengthN2 : PLMD::isdb::CS2Backbone::RingInfo
- lengthNV : PLMD::isdb::CS2Backbone::RingInfo
- lengthString : PLMD::Units
- lenunit : PLMD::generic::DumpAtoms
- lepton_func : PLMD::switchContainers::leptonSwitch
- lepton_ref : PLMD::LeptonCall
- lepton_ref_deriv : PLMD::LeptonCall
- leptonSwitch() : PLMD::switchContainers::leptonSwitch
- leptonx2 : PLMD::switchContainers::leptonSwitch
- lessThanOne : PLMD::switchContainers::rational< isFast, nis2m >
- LEU : PLMD::isdb::CS2Backbone, PLMD::isdb::SAXS
- LEU_BB : PLMD::isdb::SAXS
- LEU_SC1 : PLMD::isdb::SAXS
- ligand_com : PLMD::funnel::FUNNEL_PS
- LIKE_GAUSS : PLMD::isdb::Metainference, PLMD::isdb::MetainferenceBase
- LIKE_LOGN : PLMD::isdb::Metainference, PLMD::isdb::MetainferenceBase
- limitmax : PLMD::FlexibleBin
- limitmin : PLMD::FlexibleBin
- line : PLMD::ActionOptions, PLMD::CLToolOptions, PLMD::Exception::Location, PLMD::TokenizedLine
- linear : PLMD::gridtools::EvaluateGridFunction
- linear_coeffs : PLMD::sizeshape::position_linear_proj
- LinearBasisSet : PLMD::ves::CoeffsBase
- LinearBasisSetExpansion() : PLMD::ves::LinearBasisSetExpansion
- linearInterpolation() : PLMD::ves::GridLinearInterpolation
- linemap : PLMD::Action
- linemin() : PLMD::MinimiseBase< FCLASS >
- linePrefix : PLMD::OFile
- linesearch() : PLMD::RootFindingBase< FCLASS >
- link() : PLMD::FileBase, PLMD::OFile
- link_cutoff : PLMD::LinkCells
- linkAction() : PLMD::ves::BasisFunctions, PLMD::ves::CoeffsBase, PLMD::ves::LinearBasisSetExpansion, PLMD::ves::TargetDistribution, PLMD::ves::TD_LinearCombination, PLMD::ves::TD_ProductCombination, PLMD::ves::TD_ProductDistribution
- linkaction : PLMD::Keywords::keyInfo
- linkActionInDocs() : PLMD::Keywords
- linkBiasGrid() : PLMD::ves::TargetDistribution, PLMD::ves::TD_LinearCombination, PLMD::ves::TD_ProductCombination, PLMD::ves::TD_ProductDistribution
- linkBiasWithoutCutoffGrid() : PLMD::ves::TargetDistribution, PLMD::ves::TD_LinearCombination, PLMD::ves::TD_ProductCombination, PLMD::ves::TD_ProductDistribution
- LinkCells() : PLMD::LinkCells
- linkcells : PLMD::adjmat::AdjacencyMatrixBase< T >
- linked : PLMD::OFile
- linkFesGrid() : PLMD::ves::TargetDistribution, PLMD::ves::TD_LinearCombination, PLMD::ves::TD_ProductCombination, PLMD::ves::TD_ProductDistribution
- linkOptimizer() : PLMD::ves::VesBias
- linkpage : PLMD::Keywords::keyInfo
- linkVesBias() : PLMD::ves::BasisFunctions, PLMD::ves::CoeffsBase, PLMD::ves::LinearBasisSetExpansion, PLMD::ves::TargetDistribution, PLMD::ves::TD_LinearCombination, PLMD::ves::TD_ProductCombination, PLMD::ves::TD_ProductDistribution
- list() : PLMD::CLToolRegister
- llread() : PLMD::IFile
- llwrite() : PLMD::OFile
- lm_inv_ : PLMD::eds::EDS
- lm_mixing_par_ : PLMD::eds::EDS
- LMEM : PLMD::membranefusion::fusionPoreExpansionP, PLMD::membranefusion::fusionPoreNucleationP, PLMD::membranefusion::memFusionP
- Load() : PLMD::setup::Load
- load() : PLMD::DLLoader, PLMD::PlumedMain
- loaded : PLMD::PlumedHandle
- loadReference() : PLMD::function::FuncPathGeneral
- local : PLMD::PlumedHandle
- local_search() : PLMD::maze::Memetic
- local_search_off() : PLMD::maze::Memetic
- local_search_on() : PLMD::maze::Memetic
- local_search_on_ : PLMD::maze::Memetic
- local_search_rate_ : PLMD::maze::Memetic
- local_search_type_ : PLMD::maze::Memetic
- local_xsyevr() : PLMD::TensorGenericAux
- LocalAverage() : PLMD::symfunc::LocalAverage
- LocalCrystallinity() : PLMD::symfunc::LocalCrystallinity
- localDeltaBias : PLMD::GREX
- LocalEnsemble() : PLMD::function::LocalEnsemble
- LocalSteinhardt() : PLMD::symfunc::LocalSteinhardt
- localUNow : PLMD::GREX
- localUSwap : PLMD::GREX
- Location() : PLMD::Exception::Location
- lockRequestArguments : PLMD::ActionWithArguments
- lockRequestAtoms : PLMD::ActionAtomistic
- lockRequests() : PLMD::Action, PLMD::ActionAtomistic, PLMD::ActionWithArguments, PLMD::ActionWithVector, PLMD::contour::DistanceFromContourBase, PLMD::generic::DumpAtoms, PLMD::generic::PrintNDX, PLMD::isdb::EMMI, PLMD::isdb::MetainferenceBase
- LOG : PLMD::lepton::Operation
- Log() : PLMD::lepton::Operation::Log
- log : PLMD::Action, PLMD::function::FilesHandler, PLMD::PlumedMain, PLMD::Stopwatch, PLMD::TargetDist
- log2() : PLMD::ves::VesTools
- log_fwd : PLMD::PlumedMain
- log_golden2 : PLMD::gridtools::GridCoordinatesObject
- log_targetdist_grid_pntr_ : PLMD::ves::LinearBasisSetExpansion, PLMD::ves::TargetDistribution
- logActivity : PLMD::generic::Debug
- logAllValuesAndDerivatives() : PLMD::Grid
- logClose : PLMD::colvar::PathMSDBase
- logdet : PLMD::Matrix< T >
- LogMFD() : PLMD::logmfd::LogMFD
- logRequestedAtoms : PLMD::generic::Debug
- LogSumExp() : PLMD::landmarks::LogSumExp
- logTargetDistGrid() : PLMD::ves::TargetDistribution
- logTemperingSpecs() : PLMD::bias::MetaD
- logweights_ : PLMD::eds::EDS
- loopEnd() : PLMD::mapping::PathReparameterization
- Loss() : PLMD::maze::Loss
- loss_ : PLMD::maze::Optimizer
- low_sf : PLMD::adjmat::TopologyMatrix
- lowb : PLMD::HistogramBead
- lower : PLMD::CheckInRange, PLMD::generic::UpdateIf
- lower_only_ : PLMD::opes::ECVumbrellasFile, PLMD::opes::ECVumbrellasLine
- lowerboundary : PLMD::drr::UIestimator::n_matrix, PLMD::drr::UIestimator::n_vector< T >, PLMD::drr::UIestimator::UIestimator
- lowerlimits : PLMD::generic::Committor
- lowI_ : PLMD::bias::MetaD, PLMD::bias::PBMetaD, PLMD::BiasRepresentation, PLMD::function::FuncSumHills
- ls() : PLMD::Tools
- lsearch() : PLMD::RootFindingBase< FCLASS >
- ltrim() : PLMD::Tools
- luus_jaakola() : PLMD::maze::Memetic
- LWalls() : PLMD::bias::LWalls
- LYS : PLMD::isdb::CS2Backbone, PLMD::isdb::SAXS
- LYS_BB : PLMD::isdb::SAXS
- LYS_SC1 : PLMD::isdb::SAXS
- LYS_SC2 : PLMD::isdb::SAXS