PLMD::RMSD Member List

This is the complete list of members for PLMD::RMSD, including all inherited members.

align	PLMD::RMSD	private
AlignmentMethod enum name	PLMD::RMSD	private
alignmentMethod	PLMD::RMSD	private
calculate(const std::vector< Vector > &positions, std::vector< Vector > &derivatives, bool squared=false)	PLMD::RMSD
clear()	PLMD::RMSD
displace	PLMD::RMSD	private
getMethod()	PLMD::RMSD
log	PLMD::RMSD	private
myoptimalalignment	PLMD::RMSD	private
operator=(const RMSD &)	PLMD::RMSD
OPTIMAL enum value	PLMD::RMSD	private
OPTIMAL_FAST enum value	PLMD::RMSD	private
optimalAlignment(const std::vector< double > &align, const std::vector< double > &displace, const std::vector< Vector > &positions, const std::vector< Vector > &reference, std::vector< Vector > &derivatives, bool squared=false)	PLMD::RMSD
reference	PLMD::RMSD	private
RMSD(Log &log)	PLMD::RMSD
RMSD(const RMSD &)	PLMD::RMSD
set(const PDB &, std::string mytype)	PLMD::RMSD
setAlign(const std::vector< double > &align)	PLMD::RMSD
setDisplace(const std::vector< double > &displace)	PLMD::RMSD
setReference(const std::vector< Vector > &reference)	PLMD::RMSD
setType(std::string mytype)	PLMD::RMSD
SIMPLE enum value	PLMD::RMSD	private
simpleAlignment(const std::vector< double > &align, const std::vector< double > &displace, const std::vector< Vector > &positions, const std::vector< Vector > &reference, Log *&log, std::vector< Vector > &derivatives, bool squared=false)	PLMD::RMSD
~RMSD()	PLMD::RMSD